SESubstancePhysicochemicals Class Reference

#include <SESubstancePhysicochemicals.h>

Inherits Loggable.

Public Member Functions
	SESubstancePhysicochemicals (Logger *logger)
virtual	~SESubstancePhysicochemicals ()
virtual void	Clear ()
virtual bool	IsValid () const
virtual const SEScalar *	GetScalar (const std::string &name)
virtual bool	HasAcidDissociationConstant () const
virtual SEScalar &	GetAcidDissociationConstant ()
virtual double	GetAcidDissociationConstant () const
virtual eSubstance_BindingProtein	GetBindingProtein () const
virtual void	SetBindingProtein (eSubstance_BindingProtein state)
virtual bool	HasBindingProtein () const
virtual void	InvalidateBindingProtein ()
virtual bool	HasBloodPlasmaRatio () const
virtual SEScalar &	GetBloodPlasmaRatio ()
virtual double	GetBloodPlasmaRatio () const
virtual bool	HasFractionUnboundInPlasma () const
virtual SEScalar0To1 &	GetFractionUnboundInPlasma ()
virtual double	GetFractionUnboundInPlasma () const
virtual eSubstance_IonicState	GetIonicState () const
virtual void	SetIonicState (eSubstance_IonicState state)
virtual bool	HasIonicState () const
virtual void	InvalidateIonicState ()
virtual bool	HasLogP () const
virtual SEScalar &	GetLogP ()
virtual double	GetLogP () const
virtual bool	HasOralAbsorptionRateConstant () const
virtual SEScalar &	GetOralAbsorptionRateConstant ()
virtual double	GetOralAbsorptionRateConstant () const
Public Member Functions inherited from Loggable
	Loggable (Logger *logger=nullptr)
	Loggable (std::string const &logfile)
virtual	~Loggable ()
virtual Logger *	GetLogger () const
virtual void	SetLogger (Logger &logger)
virtual void	Debug (std::string const &msg, std::string const &origin=empty) const
virtual void	Debug (std::stringstream &msg, std::string const &origin=empty) const
virtual void	Debug (std::ostream &msg, std::string const &origin=empty) const
virtual void	Info (std::string const &msg, std::string const &origin=empty) const
virtual void	Info (std::stringstream &msg, std::string const &origin=empty) const
virtual void	Info (const std::stringstream &msg, std::string const &origin=empty) const
virtual void	Info (std::ostream &msg, std::string const &origin=empty) const
virtual void	Warning (std::string const &msg, std::string const &origin=empty) const
virtual void	Warning (std::stringstream &msg, std::string const &origin=empty) const
virtual void	Warning (std::ostream &msg, std::string const &origin=empty) const
virtual void	Error (std::string const &msg, std::string const &origin=empty) const
virtual void	Error (std::stringstream &msg, std::string const &origin=empty) const
virtual void	Error (std::ostream &msg, std::string const &origin=empty) const
virtual void	Fatal (std::string const &msg, std::string const &origin=empty) const
virtual void	Fatal (std::stringstream &msg, std::string const &origin=empty) const
virtual void	Fatal (std::ostream &msg, std::string const &origin=empty) const

Protected Attributes
SEScalar *	m_AcidDissociationConstant
eSubstance_BindingProtein	m_BindingProtein
SEScalar *	m_BloodPlasmaRatio
SEScalar0To1 *	m_FractionUnboundInPlasma
eSubstance_IonicState	m_IonicState
SEScalar *	m_LogP
SEScalar *	m_OralAbsorptionRateConstant
Protected Attributes inherited from Loggable
bool	myLogger
Logger *	m_Logger

Friends
class	PBSubstance

Additional Inherited Members
Static Public Attributes inherited from Loggable
static const std::string	empty

Constructor & Destructor Documentation

SESubstancePhysicochemicals()

SESubstancePhysicochemicals::SESubstancePhysicochemicals

(

Logger *

logger

)

~SESubstancePhysicochemicals()

SESubstancePhysicochemicals::~SESubstancePhysicochemicals ( )

virtual

Member Function Documentation

Clear()

void SESubstancePhysicochemicals::Clear ( )

virtual

GetAcidDissociationConstant() [1/2]

SEScalar & SESubstancePhysicochemicals::GetAcidDissociationConstant ( )

virtual

GetAcidDissociationConstant() [2/2]

double SESubstancePhysicochemicals::GetAcidDissociationConstant ( ) const

virtual

GetBindingProtein()

eSubstance_BindingProtein SESubstancePhysicochemicals::GetBindingProtein ( ) const

virtual

GetBloodPlasmaRatio() [1/2]

SEScalar & SESubstancePhysicochemicals::GetBloodPlasmaRatio ( )

virtual

GetBloodPlasmaRatio() [2/2]

double SESubstancePhysicochemicals::GetBloodPlasmaRatio ( ) const

virtual

GetFractionUnboundInPlasma() [1/2]

SEScalar0To1 & SESubstancePhysicochemicals::GetFractionUnboundInPlasma ( )

virtual

GetFractionUnboundInPlasma() [2/2]

double SESubstancePhysicochemicals::GetFractionUnboundInPlasma ( ) const

virtual

GetIonicState()

eSubstance_IonicState SESubstancePhysicochemicals::GetIonicState ( ) const

virtual

GetLogP() [1/2]

SEScalar & SESubstancePhysicochemicals::GetLogP ( )

virtual

GetLogP() [2/2]

double SESubstancePhysicochemicals::GetLogP ( ) const

virtual

GetOralAbsorptionRateConstant() [1/2]

SEScalar & SESubstancePhysicochemicals::GetOralAbsorptionRateConstant ( )

virtual

GetOralAbsorptionRateConstant() [2/2]

double SESubstancePhysicochemicals::GetOralAbsorptionRateConstant ( ) const

virtual

GetScalar()

const SEScalar * SESubstancePhysicochemicals::GetScalar ( const std::string &  name )

virtual

HasAcidDissociationConstant()

bool SESubstancePhysicochemicals::HasAcidDissociationConstant ( ) const

virtual

HasBindingProtein()

bool SESubstancePhysicochemicals::HasBindingProtein ( ) const

virtual

HasBloodPlasmaRatio()

bool SESubstancePhysicochemicals::HasBloodPlasmaRatio ( ) const

virtual

HasFractionUnboundInPlasma()

bool SESubstancePhysicochemicals::HasFractionUnboundInPlasma ( ) const

virtual

HasIonicState()

bool SESubstancePhysicochemicals::HasIonicState ( ) const

virtual

HasLogP()

bool SESubstancePhysicochemicals::HasLogP ( ) const

virtual

HasOralAbsorptionRateConstant()

bool SESubstancePhysicochemicals::HasOralAbsorptionRateConstant ( ) const

virtual

InvalidateBindingProtein()

void SESubstancePhysicochemicals::InvalidateBindingProtein ( )

virtual

InvalidateIonicState()

void SESubstancePhysicochemicals::InvalidateIonicState ( )

virtual

IsValid()

bool SESubstancePhysicochemicals::IsValid ( ) const

virtual

SetBindingProtein()

void SESubstancePhysicochemicals::SetBindingProtein ( eSubstance_BindingProtein  state )

virtual

SetIonicState()

void SESubstancePhysicochemicals::SetIonicState ( eSubstance_IonicState  state )

virtual

Friends And Related Function Documentation

PBSubstance

friend class PBSubstance

friend

Member Data Documentation

m_AcidDissociationConstant

SEScalar* SESubstancePhysicochemicals::m_AcidDissociationConstant

protected

m_BindingProtein

eSubstance_BindingProtein SESubstancePhysicochemicals::m_BindingProtein

protected

m_BloodPlasmaRatio

SEScalar* SESubstancePhysicochemicals::m_BloodPlasmaRatio

protected

m_FractionUnboundInPlasma

SEScalar0To1* SESubstancePhysicochemicals::m_FractionUnboundInPlasma

protected

m_IonicState

eSubstance_IonicState SESubstancePhysicochemicals::m_IonicState

protected

m_LogP

SEScalar* SESubstancePhysicochemicals::m_LogP

protected

m_OralAbsorptionRateConstant

SEScalar* SESubstancePhysicochemicals::m_OralAbsorptionRateConstant

protected