Public Member Functions | Protected Attributes | Friends | List of all members
SESubstancePhysicochemicals Class Reference

#include <SESubstancePhysicochemicals.h>

Inherits Loggable.

Public Member Functions

 SESubstancePhysicochemicals (Logger *logger)
 
virtual ~SESubstancePhysicochemicals ()
 
virtual void Clear ()
 
virtual bool IsValid () const
 
virtual const SEScalar * GetScalar (const std::string &name)
 
virtual bool HasAcidDissociationConstant () const
 
virtual SEScalar & GetAcidDissociationConstant ()
 
virtual double GetAcidDissociationConstant () const
 
virtual eSubstance_BindingProtein GetBindingProtein () const
 
virtual void SetBindingProtein (eSubstance_BindingProtein state)
 
virtual bool HasBindingProtein () const
 
virtual void InvalidateBindingProtein ()
 
virtual bool HasBloodPlasmaRatio () const
 
virtual SEScalar & GetBloodPlasmaRatio ()
 
virtual double GetBloodPlasmaRatio () const
 
virtual bool HasFractionUnboundInPlasma () const
 
virtual SEScalar0To1 & GetFractionUnboundInPlasma ()
 
virtual double GetFractionUnboundInPlasma () const
 
virtual eSubstance_IonicState GetIonicState () const
 
virtual void SetIonicState (eSubstance_IonicState state)
 
virtual bool HasIonicState () const
 
virtual void InvalidateIonicState ()
 
virtual bool HasLogP () const
 
virtual SEScalar & GetLogP ()
 
virtual double GetLogP () const
 
virtual bool HasOralAbsorptionRateConstant () const
 
virtual SEScalar & GetOralAbsorptionRateConstant ()
 
virtual double GetOralAbsorptionRateConstant () const
 
- Public Member Functions inherited from Loggable
 Loggable ()
 
 Loggable (Logger *log)
 
virtual ~Loggable ()
 
virtual Logger * GetLogger () const
 
virtual void Debug (std::string const &msg, std::string const &origin=empty) const
 
virtual void Debug (std::stringstream &msg, std::string const &origin=empty) const
 
virtual void Debug (std::ostream &msg, std::string const &origin=empty) const
 
virtual void Info (std::string const &msg, std::string const &origin=empty) const
 
virtual void Info (std::stringstream &msg, std::string const &origin=empty) const
 
virtual void Info (const std::stringstream &msg, std::string const &origin=empty) const
 
virtual void Info (std::ostream &msg, std::string const &origin=empty) const
 
virtual void Warning (std::string const &msg, std::string const &origin=empty) const
 
virtual void Warning (std::stringstream &msg, std::string const &origin=empty) const
 
virtual void Warning (std::ostream &msg, std::string const &origin=empty) const
 
virtual void Error (std::string const &msg, std::string const &origin=empty) const
 
virtual void Error (std::stringstream &msg, std::string const &origin=empty) const
 
virtual void Error (std::ostream &msg, std::string const &origin=empty) const
 
virtual void Fatal (std::string const &msg, std::string const &origin=empty) const
 
virtual void Fatal (std::stringstream &msg, std::string const &origin=empty) const
 
virtual void Fatal (std::ostream &msg, std::string const &origin=empty) const
 

Protected Attributes

SEScalar * m_AcidDissociationConstant
 
eSubstance_BindingProtein m_BindingProtein
 
SEScalar * m_BloodPlasmaRatio
 
SEScalar0To1 * m_FractionUnboundInPlasma
 
eSubstance_IonicState m_IonicState
 
SEScalar * m_LogP
 
SEScalar * m_OralAbsorptionRateConstant
 
- Protected Attributes inherited from Loggable
Logger * m_Logger
 

Friends

class PBSubstance
 

Additional Inherited Members

- Static Public Attributes inherited from Loggable
static const std::string empty
 

Constructor & Destructor Documentation

◆ SESubstancePhysicochemicals()

SESubstancePhysicochemicals::SESubstancePhysicochemicals ( Logger *  logger)

◆ ~SESubstancePhysicochemicals()

SESubstancePhysicochemicals::~SESubstancePhysicochemicals ( )
virtual

Member Function Documentation

◆ Clear()

void SESubstancePhysicochemicals::Clear ( )
virtual

◆ GetAcidDissociationConstant() [1/2]

SEScalar & SESubstancePhysicochemicals::GetAcidDissociationConstant ( )
virtual

◆ GetAcidDissociationConstant() [2/2]

double SESubstancePhysicochemicals::GetAcidDissociationConstant ( ) const
virtual

◆ GetBindingProtein()

eSubstance_BindingProtein SESubstancePhysicochemicals::GetBindingProtein ( ) const
virtual

◆ GetBloodPlasmaRatio() [1/2]

SEScalar & SESubstancePhysicochemicals::GetBloodPlasmaRatio ( )
virtual

◆ GetBloodPlasmaRatio() [2/2]

double SESubstancePhysicochemicals::GetBloodPlasmaRatio ( ) const
virtual

◆ GetFractionUnboundInPlasma() [1/2]

SEScalar0To1 & SESubstancePhysicochemicals::GetFractionUnboundInPlasma ( )
virtual

◆ GetFractionUnboundInPlasma() [2/2]

double SESubstancePhysicochemicals::GetFractionUnboundInPlasma ( ) const
virtual

◆ GetIonicState()

eSubstance_IonicState SESubstancePhysicochemicals::GetIonicState ( ) const
virtual

◆ GetLogP() [1/2]

SEScalar & SESubstancePhysicochemicals::GetLogP ( )
virtual

◆ GetLogP() [2/2]

double SESubstancePhysicochemicals::GetLogP ( ) const
virtual

◆ GetOralAbsorptionRateConstant() [1/2]

SEScalar & SESubstancePhysicochemicals::GetOralAbsorptionRateConstant ( )
virtual

◆ GetOralAbsorptionRateConstant() [2/2]

double SESubstancePhysicochemicals::GetOralAbsorptionRateConstant ( ) const
virtual

◆ GetScalar()

const SEScalar * SESubstancePhysicochemicals::GetScalar ( const std::string &  name)
virtual

◆ HasAcidDissociationConstant()

bool SESubstancePhysicochemicals::HasAcidDissociationConstant ( ) const
virtual

◆ HasBindingProtein()

bool SESubstancePhysicochemicals::HasBindingProtein ( ) const
virtual

◆ HasBloodPlasmaRatio()

bool SESubstancePhysicochemicals::HasBloodPlasmaRatio ( ) const
virtual

◆ HasFractionUnboundInPlasma()

bool SESubstancePhysicochemicals::HasFractionUnboundInPlasma ( ) const
virtual

◆ HasIonicState()

bool SESubstancePhysicochemicals::HasIonicState ( ) const
virtual

◆ HasLogP()

bool SESubstancePhysicochemicals::HasLogP ( ) const
virtual

◆ HasOralAbsorptionRateConstant()

bool SESubstancePhysicochemicals::HasOralAbsorptionRateConstant ( ) const
virtual

◆ InvalidateBindingProtein()

void SESubstancePhysicochemicals::InvalidateBindingProtein ( )
virtual

◆ InvalidateIonicState()

void SESubstancePhysicochemicals::InvalidateIonicState ( )
virtual

◆ IsValid()

bool SESubstancePhysicochemicals::IsValid ( ) const
virtual

◆ SetBindingProtein()

void SESubstancePhysicochemicals::SetBindingProtein ( eSubstance_BindingProtein  state)
virtual

◆ SetIonicState()

void SESubstancePhysicochemicals::SetIonicState ( eSubstance_IonicState  state)
virtual

Friends And Related Function Documentation

◆ PBSubstance

friend class PBSubstance
friend

Member Data Documentation

◆ m_AcidDissociationConstant

SEScalar* SESubstancePhysicochemicals::m_AcidDissociationConstant
protected

◆ m_BindingProtein

eSubstance_BindingProtein SESubstancePhysicochemicals::m_BindingProtein
protected

◆ m_BloodPlasmaRatio

SEScalar* SESubstancePhysicochemicals::m_BloodPlasmaRatio
protected

◆ m_FractionUnboundInPlasma

SEScalar0To1* SESubstancePhysicochemicals::m_FractionUnboundInPlasma
protected

◆ m_IonicState

eSubstance_IonicState SESubstancePhysicochemicals::m_IonicState
protected

◆ m_LogP

SEScalar* SESubstancePhysicochemicals::m_LogP
protected

◆ m_OralAbsorptionRateConstant

SEScalar* SESubstancePhysicochemicals::m_OralAbsorptionRateConstant
protected