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PBCompartment.h
1 /* Distributed under the Apache License, Version 2.0.
2  See accompanying NOTICE file for details.*/
3 
4 #pragma once
5 
6 #include "cdm/io/protobuf/PBCircuit.h"
7 #include "cdm/io/protobuf/PBSubstance.h"
8 // Forward Declaire SE and Protobuf Compartment Types
9 CDM_BIND_DECL2(Compartment)
10 CDM_BIND_DECL2(CompartmentLink)
11 CDM_BIND_DECL2(CompartmentManager)
12 CDM_BIND_DECL2(GasCompartment);
13 CDM_BIND_DECL2(GasCompartmentGraph);
14 CDM_BIND_DECL2(GasCompartmentLink);
15 CDM_BIND_DECL2(LiquidCompartment);
16 CDM_BIND_DECL2(LiquidCompartmentGraph);
17 CDM_BIND_DECL2(LiquidCompartmentLink);
18 CDM_BIND_DECL2(ThermalCompartment);
19 CDM_BIND_DECL2(ThermalCompartmentLink);
20 CDM_BIND_DECL2(TissueCompartment);
21 // Include Templates
22 #include "cdm/compartment/fluid/SEFluidCompartment.h"
23 #include "cdm/compartment/fluid/SEFluidCompartmentLink.h"
24 CDM_BIND_DECL(FluidCompartmentData);
25 CDM_BIND_DECL(FluidCompartmentLinkData);
26 
27 class CDM_DECL PBCompartment
28 {
29 public:
30 
31  static bool LoadCompartmentManagerFile(SECompartmentManager& mgr, const std::string& filename, SECircuitManager* circuits);
32  static void SaveCompartmentManagerFile(const SECompartmentManager& mgr, const std::string& filename);
33 
34  // Generic Compartments
35  static void Load(const CDM_BIND::CompartmentManagerData& src, SECompartmentManager& dst, SECircuitManager* circuits = nullptr);
36  static CDM_BIND::CompartmentManagerData* Unload(const SECompartmentManager& src);
37  static void Serialize(const CDM_BIND::CompartmentManagerData& src, SECompartmentManager& dst, SECircuitManager* circuits = nullptr);
38  static void Serialize(const SECompartmentManager& src, CDM_BIND::CompartmentManagerData& dst);
39  static void Serialize(const CDM_BIND::CompartmentData& src, SECompartment& dst);
40  static void Serialize(const SECompartment& src, CDM_BIND::CompartmentData& dst);
41  static void Serialize(const CDM_BIND::CompartmentLinkData& src, SECompartmentLink& dst);
42  static void Serialize(const SECompartmentLink& src, CDM_BIND::CompartmentLinkData& dst);
43 
44  // Fluid (Liquid, Gas) Compartments
45  static void Load(const CDM_BIND::GasCompartmentData& src, SEGasCompartment& dst, SESubstanceManager& subMgr, SECircuitManager* circuits = nullptr);
46  static CDM_BIND::GasCompartmentData* Unload(const SEGasCompartment& src);
47  static void Load(const CDM_BIND::GasCompartmentGraphData& src, SEGasCompartmentGraph& dst, SECompartmentManager& cmptMgr);
48  static CDM_BIND::GasCompartmentGraphData* Unload(const SEGasCompartmentGraph& src);
49  static void Load(const CDM_BIND::GasCompartmentLinkData& src, SEGasCompartmentLink& dst, SECircuitManager* circuits = nullptr);
50  static CDM_BIND::GasCompartmentLinkData* Unload(const SEGasCompartmentLink& src);
51  static void Load(const CDM_BIND::LiquidCompartmentData& src, SELiquidCompartment& dst, SESubstanceManager& subMgr, SECircuitManager* circuits = nullptr);
52  static CDM_BIND::LiquidCompartmentData* Unload(const SELiquidCompartment& src);
53  static void Load(const CDM_BIND::LiquidCompartmentGraphData& src, SELiquidCompartmentGraph& dst, SECompartmentManager& cmptMgr);
54  static CDM_BIND::LiquidCompartmentGraphData* Unload(const SELiquidCompartmentGraph& src);
55  static void Load(const CDM_BIND::LiquidCompartmentLinkData& src, SELiquidCompartmentLink& dst, SECircuitManager* circuits = nullptr);
56  static CDM_BIND::LiquidCompartmentLinkData* Unload(const SELiquidCompartmentLink& src);
57 
58  template<FLUID_COMPARTMENT_TEMPLATE>
59  static void Serialize(const CDM_BIND::FluidCompartmentData& src, SEFluidCompartment<FLUID_COMPARTMENT_TYPES>& dst, SECircuitManager* circuits = nullptr);
60  template<FLUID_COMPARTMENT_TEMPLATE>
61  static void Serialize(const SEFluidCompartment<FLUID_COMPARTMENT_TYPES>& src, CDM_BIND::FluidCompartmentData& dst);
62  template<FLUID_COMPARTMENT_LINK_TEMPLATE>
63  static void Serialize(const CDM_BIND::FluidCompartmentLinkData& src, SEFluidCompartmentLink<FLUID_COMPARTMENT_LINK_TYPES>& dst, SECircuitManager* circuits = nullptr);
64  template<FLUID_COMPARTMENT_LINK_TEMPLATE>
65  static void Serialize(const SEFluidCompartmentLink<FLUID_COMPARTMENT_LINK_TYPES>& src, CDM_BIND::FluidCompartmentLinkData& dst);
66 
67  static void Serialize(const CDM_BIND::GasCompartmentData& src, SEGasCompartment& dst, SESubstanceManager& subMgr, SECircuitManager* circuits = nullptr);
68  static void Serialize(const SEGasCompartment& src, CDM_BIND::GasCompartmentData& dst);
69  static void Serialize(const CDM_BIND::GasCompartmentGraphData& src, SEGasCompartmentGraph& dst, SECompartmentManager& cmptMgr);
70  static void Serialize(const SEGasCompartmentGraph& src, CDM_BIND::GasCompartmentGraphData& dst);
71  static void Serialize(const CDM_BIND::GasCompartmentLinkData& src, SEGasCompartmentLink& dst, SECircuitManager* circuits = nullptr);
72  static void Serialize(const SEGasCompartmentLink& src, CDM_BIND::GasCompartmentLinkData& dst);
73  static void Serialize(const CDM_BIND::LiquidCompartmentData& src, SELiquidCompartment& dst, SESubstanceManager& subMgr, SECircuitManager* circuits = nullptr);
74  static void Serialize(const SELiquidCompartment& src, CDM_BIND::LiquidCompartmentData& dst);
75  static void Serialize(const CDM_BIND::LiquidCompartmentGraphData& src, SELiquidCompartmentGraph& dst, SECompartmentManager& cmptMgr);
76  static void Serialize(const SELiquidCompartmentGraph& src, CDM_BIND::LiquidCompartmentGraphData& dst);
77  static void Serialize(const CDM_BIND::LiquidCompartmentLinkData& src, SELiquidCompartmentLink& dst, SECircuitManager* circuits = nullptr);
78  static void Serialize(const SELiquidCompartmentLink& src, CDM_BIND::LiquidCompartmentLinkData& dst);
79 
80  // Thermal
81  static void Load(const CDM_BIND::ThermalCompartmentData& src, SEThermalCompartment& dst, SECircuitManager* circuits = nullptr);
82  static CDM_BIND::ThermalCompartmentData* Unload(const SEThermalCompartment& src);
83  static void Load(const CDM_BIND::ThermalCompartmentLinkData& src, SEThermalCompartmentLink& dst, SECircuitManager* circuits = nullptr);
84  static CDM_BIND::ThermalCompartmentLinkData* Unload(const SEThermalCompartmentLink& src);
85  static void Serialize(const CDM_BIND::ThermalCompartmentData& src, SEThermalCompartment& dst, SECircuitManager* circuits = nullptr);
86  static void Serialize(const SEThermalCompartment& src, CDM_BIND::ThermalCompartmentData& dst);
87  static void Serialize(const CDM_BIND::ThermalCompartmentLinkData& src, SEThermalCompartmentLink& dst, SECircuitManager* circuits = nullptr);
88  static void Serialize(const SEThermalCompartmentLink& src, CDM_BIND::ThermalCompartmentLinkData& dst);
89 
90  // Tissue
91  static void Load(const CDM_BIND::TissueCompartmentData& src, SETissueCompartment& dst);
92  static CDM_BIND::TissueCompartmentData* Unload(const SETissueCompartment& src);
93  static void Serialize(const CDM_BIND::TissueCompartmentData& src, SETissueCompartment& dst);
94  static void Serialize(const SETissueCompartment& src, CDM_BIND::TissueCompartmentData& dst);
95 };
Definition: SESubstanceManager.h:8
Definition: SEGasCompartment.h:13
Definition: SELiquidCompartment.h:11
Definition: SECompartmentManager.h:24
Definition: SETissueCompartment.h:8
Definition: SEFluidCompartment.h:17
Definition: SECircuitManager.h:37
Definition: SELiquidCompartmentGraph.h:11
Definition: SEGasCompartmentGraph.h:10
Definition: PBCompartment.h:27
Definition: SECompartment.h:13
Definition: SEThermalCompartment.h:11

Distributed under the Apache License, Version 2.0.

See accompanying NOTICE file for details.