Public Member Functions |
Protected Member Functions |
Protected Attributes |
Friends |
List of all members
SELiquidCompartment Class Reference
#include <SELiquidCompartment.h>
Public Member Functions | |
virtual | ~SELiquidCompartment () |
void | Clear () override |
const SEScalar * | GetScalar (const std::string &name) override |
void | StateChange () override |
virtual void | Balance (BalanceLiquidBy e) |
virtual bool | HasPerfusion () const |
virtual SEScalarVolumePerTime & | GetPerfusion () |
virtual double | GetPerfusion (const VolumePerTimeUnit &unit) const |
virtual bool | HasPH () const |
virtual SEScalar & | GetPH () |
virtual double | GetPH () const |
virtual bool | HasWaterVolumeFraction () const |
virtual SEScalar0To1 & | GetWaterVolumeFraction () |
virtual double | GetWaterVolumeFraction () const |
virtual void | AddChild (SELiquidCompartment &child) |
virtual const std::vector< SELiquidCompartment * > & | GetChildren () |
virtual const std::vector< SELiquidCompartment * > & | GetLeaves () |
Public Member Functions inherited from SEFluidCompartment< SELiquidCompartmentLink, SELiquidTransportVertex, SELiquidTransportSubstance, SELiquidSubstanceQuantity > | |
virtual | ~SEFluidCompartment () |
void | Clear () override |
std::string | GetName () const override |
const SEScalar * | GetScalar (const std::string &name) override |
bool | HasChildren () const override |
virtual bool | HasNodeMapping () const |
virtual SECompartmentNodes< FLUID_COMPARTMENT_NODE > & | GetNodeMapping () |
virtual void | MapNode (SEFluidCircuitNode &node) |
virtual void | Sample (bool CycleStart) |
virtual void | SampleFlow () |
virtual bool | HasInFlow () const |
virtual const SEScalarVolumePerTime & | GetInFlow () const |
virtual double | GetInFlow (const VolumePerTimeUnit &unit) const |
virtual bool | HasAverageInFlow () const |
virtual const SEScalarVolumePerTime & | GetAverageInFlow () const |
virtual double | GetAverageInFlow (const VolumePerTimeUnit &unit) const |
virtual bool | HasOutFlow () const |
virtual const SEScalarVolumePerTime & | GetOutFlow () const |
virtual double | GetOutFlow (const VolumePerTimeUnit &unit) const |
virtual bool | HasAverageOutFlow () const |
virtual const SEScalarVolumePerTime & | GetAverageOutFlow () const |
virtual double | GetAverageOutFlow (const VolumePerTimeUnit &unit) const |
virtual bool | HasPressure () const |
virtual SEScalarPressure & | GetPressure () |
virtual double | GetPressure (const PressureUnit &unit) const |
virtual bool | HasVolume () const |
virtual SEScalarVolume & | GetVolume () |
virtual double | GetVolume (const VolumeUnit &unit) const |
virtual bool | HasSubstanceQuantities () const |
virtual bool | HasSubstanceQuantity (const SESubstance &substance) const |
virtual SubstanceQuantityType * | GetSubstanceQuantity (const SESubstance &substance) const |
virtual const std::vector< SubstanceQuantityType * > & | GetSubstanceQuantities () const |
virtual void | ZeroSubstanceQuantities () |
virtual void | AddLink (LinkType &link) |
virtual void | RemoveLink (LinkType &link) |
virtual void | RemoveLinks () |
virtual const std::vector< LinkType * > & | GetLinks () |
virtual bool | HasChild (const SEFluidCompartment &cmpt) |
Public Member Functions inherited from SECompartment | |
virtual | ~SECompartment () |
virtual void | Clear () |
virtual std::string | GetName () const |
virtual const SEScalar * | GetScalar (const std::string &name)=0 |
virtual bool | HasChildren () const =0 |
virtual void | StateChange ()=0 |
Public Member Functions inherited from Loggable | |
Loggable (Logger *logger=nullptr) | |
Loggable (std::string const &logfile) | |
virtual | ~Loggable () |
virtual Logger * | GetLogger () const |
virtual void | SetLogger (Logger &logger) |
virtual void | Debug (std::string const &msg) const |
virtual void | Debug (std::stringstream &msg) const |
virtual void | Debug (std::ostream &msg) const |
virtual void | Info (std::string const &msg) const |
virtual void | Info (std::stringstream &msg) const |
virtual void | Info (const std::stringstream &msg) const |
virtual void | Info (std::ostream &msg) const |
virtual void | Warning (std::string const &msg) const |
virtual void | Warning (std::stringstream &msg) const |
virtual void | Warning (std::ostream &msg) const |
virtual void | Error (std::string const &msg) const |
virtual void | Error (std::stringstream &msg) const |
virtual void | Error (std::ostream &msg) const |
virtual void | Fatal (std::string const &msg) const |
virtual void | Fatal (std::stringstream &msg) const |
virtual void | Fatal (std::ostream &msg) const |
Protected Member Functions | |
SELiquidCompartment (const std::string &name, Logger *logger) | |
virtual SELiquidSubstanceQuantity & | CreateSubstanceQuantity (SESubstance &substance, bool zeroOut=true) |
Protected Member Functions inherited from SEFluidCompartment< SELiquidCompartmentLink, SELiquidTransportVertex, SELiquidTransportSubstance, SELiquidSubstanceQuantity > | |
SEFluidCompartment (const std::string &name, Logger *logger) | |
virtual void | RemoveSubstanceQuantity (const SESubstance &substance) |
bool | HasQuantity () const override |
SEScalarVolume & | GetQuantity () override |
virtual double | CalculateInFlow_mL_Per_s () const |
virtual double | CalculateOutFlow_mL_Per_s () const |
std::vector< TransportSubstanceType * > & | GetTransportSubstances () override |
Protected Member Functions inherited from SECompartment | |
SECompartment (const std::string &name, Logger *logger) | |
Friends | |
class | PBCompartment |
class | SETissueCompartment |
class | SECompartmentManager |
class | SELiquidSubstanceQuantity |
Additional Inherited Members | |
Static Public Member Functions inherited from SECompartment | |
template<typename CompartmentType > | |
static void | FindLeaves (CompartmentType &cmpt, std::vector< CompartmentType * > &leaves) |
Constructor & Destructor Documentation
◆ SELiquidCompartment()
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protected |
◆ ~SELiquidCompartment()
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virtual |
Member Function Documentation
◆ AddChild()
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virtual |
◆ Balance()
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virtual |
◆ Clear()
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overridevirtual |
Reimplemented from SECompartment.
◆ CreateSubstanceQuantity()
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protectedvirtual |
◆ GetChildren()
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inlinevirtual |
◆ GetLeaves()
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inlinevirtual |
◆ GetPerfusion() [1/2]
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virtual |
◆ GetPerfusion() [2/2]
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virtual |
◆ GetPH() [1/2]
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virtual |
◆ GetPH() [2/2]
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virtual |
◆ GetScalar()
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overridevirtual |
Implements SECompartment.
◆ GetWaterVolumeFraction() [1/2]
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virtual |
◆ GetWaterVolumeFraction() [2/2]
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virtual |
◆ HasPerfusion()
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virtual |
◆ HasPH()
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virtual |
◆ HasWaterVolumeFraction()
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virtual |
◆ StateChange()
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overridevirtual |
Implements SECompartment.
Friends And Related Function Documentation
◆ PBCompartment
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friend |
◆ SECompartmentManager
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friend |
◆ SELiquidSubstanceQuantity
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friend |
◆ SETissueCompartment
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friend |
Member Data Documentation
◆ m_Children
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protected |
◆ m_Leaves
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protected |
◆ m_Perfusion
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protected |
◆ m_pH
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protected |
◆ m_WaterVolumeFraction
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protected |