#include <SELiquidCompartment.h>

Inherits SEFluidCompartment< SELiquidCompartmentLink, SELiquidTransportVertex, SELiquidTransportSubstance, SELiquidSubstanceQuantity >.

Public Member Functions
virtual	~SELiquidCompartment ()

virtual void	Clear ()

virtual const SEScalar *	GetScalar (const std::string &name)

virtual void	StateChange ()

virtual void	Balance (BalanceLiquidBy e)

virtual bool	HasPH () const

virtual SEScalar &	GetPH ()

virtual double	GetPH () const

virtual bool	HasWaterVolumeFraction () const

virtual SEScalar0To1 &	GetWaterVolumeFraction ()

virtual double	GetWaterVolumeFraction () const

virtual void	AddChild (SELiquidCompartment &child)

virtual const std::vector< SELiquidCompartment * > &	GetChildren ()

virtual const std::vector< SELiquidCompartment * > &	GetLeaves ()

Public Member Functions inherited from SEFluidCompartment< SELiquidCompartmentLink, SELiquidTransportVertex, SELiquidTransportSubstance, SELiquidSubstanceQuantity >
virtual	~SEFluidCompartment ()

virtual std::string	GetName () const

virtual bool	HasChildren () const

virtual bool	HasNodeMapping () const

virtual SECompartmentNodes< FLUID_COMPARTMENT_NODE > &	GetNodeMapping ()

virtual void	MapNode (SEFluidCircuitNode &node)

virtual bool	HasInFlow () const

virtual const SEScalarVolumePerTime &	GetInFlow () const

virtual double	GetInFlow (const VolumePerTimeUnit &unit) const

virtual bool	HasOutFlow () const

virtual const SEScalarVolumePerTime &	GetOutFlow () const

virtual double	GetOutFlow (const VolumePerTimeUnit &unit) const

virtual bool	HasPressure () const

virtual SEScalarPressure &	GetPressure ()

virtual double	GetPressure (const PressureUnit &unit) const

virtual bool	HasVolume () const

virtual SEScalarVolume &	GetVolume ()

virtual double	GetVolume (const VolumeUnit &unit) const

virtual bool	HasSubstanceQuantities () const

virtual bool	HasSubstanceQuantity (const SESubstance &substance) const

virtual SubstanceQuantityType *	GetSubstanceQuantity (const SESubstance &substance) const

virtual const std::vector< SubstanceQuantityType *> &	GetSubstanceQuantities () const

virtual void	ZeroSubstanceQuantities ()

virtual void	AddLink (LinkType &link)

virtual void	RemoveLink (LinkType &link)

virtual void	RemoveLinks ()

virtual const std::vector< LinkType *> &	GetLinks ()

virtual bool	HasChild (const SEFluidCompartment &cmpt)

Public Member Functions inherited from SECompartment
virtual	~SECompartment ()

Public Member Functions inherited from Loggable
	Loggable (Logger *logger=nullptr)

	Loggable (std::string const &logfile)

virtual	~Loggable ()

virtual Logger *	GetLogger () const

virtual void	SetLogger (Logger &logger)

virtual void	Debug (std::string const &msg, std::string const &origin=empty) const

virtual void	Debug (std::stringstream &msg, std::string const &origin=empty) const

virtual void	Debug (std::ostream &msg, std::string const &origin=empty) const

virtual void	Info (std::string const &msg, std::string const &origin=empty) const

virtual void	Info (std::stringstream &msg, std::string const &origin=empty) const

virtual void	Info (const std::stringstream &msg, std::string const &origin=empty) const

virtual void	Info (std::ostream &msg, std::string const &origin=empty) const

virtual void	Warning (std::string const &msg, std::string const &origin=empty) const

virtual void	Warning (std::stringstream &msg, std::string const &origin=empty) const

virtual void	Warning (std::ostream &msg, std::string const &origin=empty) const

virtual void	Error (std::string const &msg, std::string const &origin=empty) const

virtual void	Error (std::stringstream &msg, std::string const &origin=empty) const

virtual void	Error (std::ostream &msg, std::string const &origin=empty) const

virtual void	Fatal (std::string const &msg, std::string const &origin=empty) const

virtual void	Fatal (std::stringstream &msg, std::string const &origin=empty) const

virtual void	Fatal (std::ostream &msg, std::string const &origin=empty) const

Protected Member Functions
	SELiquidCompartment (const std::string &name, Logger *logger)

virtual SELiquidSubstanceQuantity &	CreateSubstanceQuantity (SESubstance &substance, bool zeroOut=true)

Protected Member Functions inherited from SEFluidCompartment< SELiquidCompartmentLink, SELiquidTransportVertex, SELiquidTransportSubstance, SELiquidSubstanceQuantity >
	SEFluidCompartment (const std::string &name, Logger *logger)

virtual void	RemoveSubstanceQuantity (const SESubstance &substance)

virtual bool	HasQuantity () const

virtual SEScalarVolume &	GetQuantity ()

virtual double	CalculateInFlow_mL_Per_s () const

virtual double	CalculateOutFlow_mL_Per_s () const

virtual std::vector< TransportSubstanceType *> &	GetTransportSubstances ()

Protected Member Functions inherited from SECompartment
	SECompartment (const std::string &name, Logger *logger)

Protected Attributes
SEScalar *	m_pH

SEScalar0To1 *	m_WaterVolumeFraction

std::vector< SELiquidCompartment * >	m_Children

std::vector< SELiquidCompartment * >	m_Leaves

Protected Attributes inherited from SEFluidCompartment< SELiquidCompartmentLink, SELiquidTransportVertex, SELiquidTransportSubstance, SELiquidSubstanceQuantity >
SEScalarVolumePerTime *	m_InFlow

SEScalarVolumePerTime *	m_OutFlow

SEScalarPressure *	m_Pressure

SEScalarVolume *	m_Volume

std::vector< SubstanceQuantityType *>	m_SubstanceQuantities

std::vector< TransportSubstanceType *>	m_TransportSubstances

std::vector< LinkType *>	m_Links

std::vector< LinkType *>	m_IncomingLinks

std::vector< LinkType *>	m_OutgoingLinks

std::vector< SEFluidCompartment *>	m_FluidChildren

SECompartmentNodes< FLUID_COMPARTMENT_NODE >	m_Nodes

Protected Attributes inherited from SECompartment
std::string	m_Name

Protected Attributes inherited from Loggable
bool	myLogger

Logger *	m_Logger

Friends
class	PBCompartment

class	SETissueCompartment

class	SECompartmentManager

class	SELiquidSubstanceQuantity

Additional Inherited Members
Static Public Member Functions inherited from SECompartment
template<typename CompartmentType >
static void	FindLeaves (CompartmentType &cmpt, std::vector< CompartmentType *> &leaves)

Static Public Attributes inherited from Loggable
static const std::string	empty

Constructor & Destructor Documentation

◆ SELiquidCompartment()

SELiquidCompartment::SELiquidCompartment	(	const std::string &	name,
		Logger *	logger
	)

protected

◆ ~SELiquidCompartment()

SELiquidCompartment::~SELiquidCompartment ( )

virtual

Member Function Documentation

◆ AddChild()

void SELiquidCompartment::AddChild ( SELiquidCompartment & child )

virtual

◆ Balance()

void SELiquidCompartment::Balance ( BalanceLiquidBy e )

virtual

◆ Clear()

void SELiquidCompartment::Clear ( )

virtual

Reimplemented from SEFluidCompartment< SELiquidCompartmentLink, SELiquidTransportVertex, SELiquidTransportSubstance, SELiquidSubstanceQuantity >.

◆ CreateSubstanceQuantity()

SELiquidSubstanceQuantity & SELiquidCompartment::CreateSubstanceQuantity	(	SESubstance &	substance,
		bool	zeroOut = `true`
	)

protectedvirtual

◆ GetChildren()

virtual const std::vector<SELiquidCompartment*>& SELiquidCompartment::GetChildren ( )

inlinevirtual

◆ GetLeaves()

virtual const std::vector<SELiquidCompartment*>& SELiquidCompartment::GetLeaves ( )

inlinevirtual

◆ GetPH() [1/2]

SEScalar & SELiquidCompartment::GetPH ( )

virtual

◆ GetPH() [2/2]

double SELiquidCompartment::GetPH ( ) const

virtual

◆ GetScalar()

const SEScalar * SELiquidCompartment::GetScalar ( const std::string & name )

virtual

Reimplemented from SEFluidCompartment< SELiquidCompartmentLink, SELiquidTransportVertex, SELiquidTransportSubstance, SELiquidSubstanceQuantity >.

◆ GetWaterVolumeFraction() [1/2]

SEScalar0To1 & SELiquidCompartment::GetWaterVolumeFraction ( )

virtual

◆ GetWaterVolumeFraction() [2/2]

double SELiquidCompartment::GetWaterVolumeFraction ( ) const

virtual

◆ HasPH()

bool SELiquidCompartment::HasPH ( ) const

virtual

◆ HasWaterVolumeFraction()

bool SELiquidCompartment::HasWaterVolumeFraction ( ) const

virtual

◆ StateChange()

void SELiquidCompartment::StateChange ( )

virtual

Implements SECompartment.

Friends And Related Function Documentation

◆ PBCompartment

friend class PBCompartment

friend

◆ SECompartmentManager

friend class SECompartmentManager

friend

◆ SELiquidSubstanceQuantity

friend class SELiquidSubstanceQuantity

friend

◆ SETissueCompartment

friend class SETissueCompartment

friend

Member Data Documentation

◆ m_Children

std::vector<SELiquidCompartment*> SELiquidCompartment::m_Children

protected

◆ m_Leaves

std::vector<SELiquidCompartment*> SELiquidCompartment::m_Leaves

protected

◆ m_pH

SEScalar* SELiquidCompartment::m_pH

protected

◆ m_WaterVolumeFraction

SEScalar0To1* SELiquidCompartment::m_WaterVolumeFraction

protected

Public Member Functions

Protected Member Functions

Protected Attributes

Friends

Additional Inherited Members

Constructor & Destructor Documentation

◆ SELiquidCompartment()

◆ ~SELiquidCompartment()

Member Function Documentation

◆ AddChild()

◆ Balance()

◆ Clear()

◆ CreateSubstanceQuantity()

◆ GetChildren()

◆ GetLeaves()

◆ GetPH() [1/2]

◆ GetPH() [2/2]

◆ GetScalar()

◆ GetWaterVolumeFraction() [1/2]

◆ GetWaterVolumeFraction() [2/2]

◆ HasPH()

◆ HasWaterVolumeFraction()

◆ StateChange()

Friends And Related Function Documentation

◆ PBCompartment

◆ SECompartmentManager

◆ SELiquidSubstanceQuantity

◆ SETissueCompartment

Member Data Documentation

◆ m_Children

◆ m_Leaves

◆ m_pH

◆ m_WaterVolumeFraction